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aidssi
|
Data from the Amsterdam Cohort Studies on HIV infection and AIDS |
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bmt
|
BMT data from Klein and Moeschberger |
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crprep(<default>)
|
Function to create weighted data set for competing risks analyses |
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Cuminc()
|
Calculate nonparametric cumulative incidence functions and associated
standard errors |
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cutLMms()
|
Cut a multi-state data set at a landmark time point |
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EBMT cause of death data
|
Data from the European Society for Blood and Marrow Transplantation (EBMT) |
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EBMT data
|
Data from the European Society for Blood and Marrow Transplantation (EBMT) |
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EBMT platelet recovery data
|
Data from the European Society for Blood and Marrow Transplantation (EBMT) |
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EBMT year of relapse data
|
Data from the European Society for Blood and Marrow Transplantation (EBMT) |
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ELOS()
|
Expected length of stay |
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etm2msdata()
|
Converts between etm and msdata format |
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events()
|
Count number of observed transitions |
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expand.covs(<msdata>)
|
Expand covariates in multi-state dataset in long format |
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expand.covs()
|
Expand covariates in competing risks dataset in stacked format |
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Liver cirrhosis data
|
Abnormal prothrombin levels in liver cirrhosis |
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LMAJ()
|
Landmark Aalen-Johansen method |
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MarkovTest()
|
Log-rank based test for the validity of the Markov assumption |
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msboot()
|
Bootstrap function in multi-state models |
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msdata2etm()
|
msdata to etm format |
|
msfit()
|
Compute subject-specific transition hazards with (co-)variances |
|
msprep()
|
Function to prepare dataset for multi-state modeling in long format from
dataset in wide format |
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mssample()
|
Sample paths through a multi-state model |
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mstate-package
|
Data preparation, estimation and prediction in multi-state models |
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paths()
|
Find all possible trajectories through a given multi-state model |
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plot(<Cuminc>)
|
Plot method for Cuminc objects |
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plot(<MarkovTest>)
|
Plot method for a MarkovTest object |
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plot(<msfit>)
|
Plot method for an msfit object |
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plot(<probtrans>)
|
Plot method for a probtrans object |
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print(<MarkovTest>)
|
Print method for a MarkovTest object |
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print(<msdata>)
|
Print method for a msdata object |
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print(<summary.msfit>)
|
Print method for summary.msfit object |
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print(<summary.probtrans>)
|
Print method for a summary.probtrans object |
|
probtrans()
|
Compute subject-specific or overall transition probabilities with standard
errors |
|
redrank()
|
Reduced rank proportional hazards model for competing risks and multi-state
models |
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summary(<Cuminc>)
|
Summary method for a summary.Cuminc object |
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summary(<msfit>)
|
Summary method for an msfit object |
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summary(<probtrans>)
|
Summary method for a probtrans object |
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trans2tra()
|
Convert transition matrix from mstate to etm format |
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transhelp
|
Help functions for transition matrix |
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transMat()
|
Define transition matrix for multi-state model |
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vis.mirror.pt()
|
Mirror plot comparing two probtrans objects |
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vis.multiple.pt()
|
Visualise multiple probtrans objects |
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xsect()
|
Make a cross-section of multi-state data at a given time point |